Welcome to ImmuCC

ImmuCC server was developed to estimate the relative immune cell compositions in mouse tissue from the transcriptomal data profiled on both microarray and RNA-Seq platforms.

Upload your expression matrix (CSV or TXT format)

Download Test Data
Test data: Mouse RNA-seq expression matrix (sample dataset)
You will receive a confirmation email when the analysis is complete.
Citation
  1. For microarray data analysis, please cite:
    Chen Z, Huang A, Sun J, Jiang T, Qin F.X and Wu A. Inference of immune cell composition on the expression profiles of mouse tissue[J]. Scientific reports, 2017, 7: 40508.
  2. For RNA-Seq data analysis, please cite:
    Chen Z, Quan L, Huang A, Zhao Q, Yuan Y, Yuan X, Shen Q, Shang J, Ben Y, Qin FX-F and Wu A (2018) seq-ImmuCC: Cell-Centric View of Tissue Transcriptome Measuring Cellular Compositions of Immune Microenvironment From Mouse RNA-Seq Data. Front. Immunol. 9:1286.